That's of course a solution I didn't think of. :slightly_smiling_face:
But I am not sure if this is the full solution as it would mean we need to make an exception for every file that will get deleted by a Matomo release (e.g. this time there is also
Tried to add a test for this, but couldn't find a way to generate the manifest file. Perhaps if the logic were moved into a matomo command or something it would be possible. For now will just merge.